Spinal Cord Toolbox

software
Has use	digital imaging
Operating system	Linux
Programmed in	Python
Copyright license	MIT License
Copyright status	copyrighted

Kuutorgal ɓalndu (SCT)^[1] ko kuutorɗe ƴeewndorɗe moƴƴe ngam natal ɓalndu keɓtinaangal e ƴeewndo magnetik. Ko ɓuri teeŋtude e geɗe ɗee ko seerndude, winnditaade e hiisaade mette anatomiije.

Tagle

Propseg Otomatik ƴettugol ɓalndu.^[2]

Template PAM50 ko template anatomique mo ƴiiƴam ɓalndu ɓuuɓnata ƴiiƴam timmuɗam e ngaandi, ina heɓee ngam ƴeewndaade MRI teeŋtuɗo T1-, T2- e T2*. Template PAM50 ina waɗi peccitagol baawngol wonde e huunde ɓaleere, huunde ɓaleere, CSF kam e atlasuuji baawɗi wonde e nokkuuji ɓaleeji e laabi huunde ɓaleere.^[3]^[4] The template also include segmentation of spinal levels for automatic assessment of metrics at specific locations.^[5] Template oo ina waɗi kadi peccitagol toɓɓe ɓalndu ngam ƴeewtaade otomatik metrik e nokkuuji keertiiɗi.

Atlas Matter daneejo ina waɗi 29 masɗe volume feccere ɗe matter tracts.

Tuugnorgal

↑ "Spinal Cord Toolbox". SourceForge.net. 2013-09-28. Archived from the original on 2015-10-30. Retrieved 2025-07-03.
↑ "Release 7.0 - spinalcordtoolbox/spinalcordtoolbox". GitHub. 2025-04-24. Retrieved 2025-07-03.
↑ Fonov V, Le Troter A, Taso M, De Leener B, Leveque G, Benhamou M, Sdika M, Benali H, Pradat PF, Collins DL, Callot V, Cohen-Adad J. Framework for integrated MRI average of the spinal cord white and gray matter: The MNI-Poly-AMU template. Neuroimage 2014. DOI: 10.1016/j.neuroimage.2014.08.057
↑ De Leener B, Fonov V, Collins DL, Callot V, Stikov N, Cohen-Adad J. PAM50: Multimodal template of the brainstem and spinal cord compatible with the ICBM152 space. Proceedings of the 25th Annual Meeting of ISMRM, Honolulu, USA. 2017.
↑ Cadotte DW, Cadotte A, Cohen-Adad J, Fleet D, Livne M, Mikulis D, Fehlings MG. Resolving the anatomic variability of the human cervical spinal cord: a solution to facilitate advanced neural imaging. Proceedings of the 22nd Annual Meeting of ISMRM, Milan, Italy 2014:1719.

[1] "Spinal Cord Toolbox". SourceForge.net. 2013-09-28. Archived from the original on 2015-10-30. Retrieved 2025-07-03.

[2] "Release 7.0 - spinalcordtoolbox/spinalcordtoolbox". GitHub. 2025-04-24. Retrieved 2025-07-03.

[3] Fonov V, Le Troter A, Taso M, De Leener B, Leveque G, Benhamou M, Sdika M, Benali H, Pradat PF, Collins DL, Callot V, Cohen-Adad J. Framework for integrated MRI average of the spinal cord white and gray matter: The MNI-Poly-AMU template. Neuroimage 2014. DOI: 10.1016/j.neuroimage.2014.08.057

[4] De Leener B, Fonov V, Collins DL, Callot V, Stikov N, Cohen-Adad J. PAM50: Multimodal template of the brainstem and spinal cord compatible with the ICBM152 space. Proceedings of the 25th Annual Meeting of ISMRM, Honolulu, USA. 2017.

[5] Cadotte DW, Cadotte A, Cohen-Adad J, Fleet D, Livne M, Mikulis D, Fehlings MG. Resolving the anatomic variability of the human cervical spinal cord: a solution to facilitate advanced neural imaging. Proceedings of the 22nd Annual Meeting of ISMRM, Milan, Italy 2014:1719.

[1]

[2]

[3]

[4]

[5]